Working with Hydrogen + Atom + Jupyter

            ## Install Anaconda (and therefore Jupyter)
  1. install anaconda (this get’s you jupyter)
    Add the conda binary to your path

PATH=$PATH:/Users/steve/anaconda3/bin

  1. install

conda install -c r r-essentials

see https://docs.anaconda.com/anaconda/user-guide/tasks/use-r-language

Note that this doesn’t install data.table
Installing R packages within the conda environment requires

install.packages("png", "/anaconda3/lib/R/library")

  1. install atom
  2. install hydrogen

Jupyter notebooks

While working on your own machine, need to disable security while working locally (else can’t use hydrogen)

first of all generate a default config file

jupyter notebook --generate-config

then edit ~\.jupyter\jupyter_notebook_config.py; specifically uncomment the token and password settings and convert to empty strings

c.NotebookApp.token = ''
c.NotebookApp.password = ''